Other background
Proteins everywhere
Identifying proteins
Using protein databases
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Case study protocol

  • Digestion procedure

    Protein databases

  • Entrez Protein
  • UCSF MS Facility (MS-Fit, MS-Tag, MS-Digest,...)
  • ExPASy Molecular Biology Server

    Selected Bibliography

  • PROWL for Intranet
  • Clauser, Karl and Peter Baker. Description, Instructions, and Tips for MS-Fit.
  • Shevchenko, A., et al. Peptide Sequencing by Mass Spectrometry for Homology Searches and Cloning of Genes. J. Prot. Chem 16 (5) 481-490 (1997).
  • Shevchenko, A., et al. Linking Genome and Proteome by Mass Spectrometry: Large-scale Identification of Yeast Proteins from Two Dimensional Gels. Proc. Natl. Acad. Sci. USA 93 (25) 14440-14445 (1996)
  • Urich, Klaus.Comparative Animal Biochemistry.New York:Springer-Verlag, 1990.

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